Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 BNIP3P1-202ENST00000550043 1585 ntBASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 AP003680.1-201ENST00000598970 3660 ntBASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 CLK3P2-201ENST00000427566 1453 ntBASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 U91328.1-201ENST00000437528 223 ntBASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 ATP5G2P4-201ENST00000442175 420 ntBASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA2E9PIF3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 AC011477.6-201ENST00000604980 1927 ntBASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 Z97205.2-201ENST00000564697 1639 ntBASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 383.8 ms