Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 MESTP3-201ENST00000503460 968 ntBASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 AC008805.1-201ENST00000590892 364 ntBASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 AC087392.5-201ENST00000612517 489 ntBASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 LINC00431-202ENST00000636375 159 ntBASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM88BA6NKF7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 BAK1P1-201ENST00000317045 636 ntBASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 BCAS2P2-201ENST00000425064 674 ntBASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 VDAC1P1-201ENST00000439229 848 ntBASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 DUX4L46-201ENST00000566845 751 ntBASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM88BA6NKF7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM88BA6NKF7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM88BA6NKF7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM88BA6NKF7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
TMEM88BA6NKF7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM88BA6NKF7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM88BA6NKF7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TMEM88BA6NKF7 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.83■□□□□ 0.45
TMEM88BA6NKF7 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.83■□□□□ 0.45
TMEM88BA6NKF7 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.83■□□□□ 0.45
TMEM88BA6NKF7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM88BA6NKF7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 CHCHD2P9-201ENST00000461726 456 ntBASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 MIR5196-201ENST00000578146 115 ntBASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 AC011247.3-201ENST00000603297 438 ntBASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms