Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 CICP8-201ENST00000455800 2813 ntBASIC17.11■□□□□ 0.33
CCDC66A2RUB6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 AL356585.2-201ENST00000625078 2396 ntBASIC17.11■□□□□ 0.33
CCDC66A2RUB6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 AL023775.1-201ENST00000454907 1746 ntBASIC17.1■□□□□ 0.33
CCDC66A2RUB6 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 VN2R19P-201ENST00000442399 1052 ntBASIC17.1■□□□□ 0.33
CCDC66A2RUB6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 AP002469.2-201ENST00000531724 424 ntBASIC17.1■□□□□ 0.33
CCDC66A2RUB6 AC109635.5-201ENST00000533593 962 ntBASIC17.1■□□□□ 0.33
CCDC66A2RUB6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC66A2RUB6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 REXO1L1P-202ENST00000608646 1974 ntBASIC17.09■□□□□ 0.33
CCDC66A2RUB6 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 AL773604.1-201ENST00000617417 272 ntBASIC17.09■□□□□ 0.33
CCDC66A2RUB6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 TET3-201ENST00000305799 5174 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 AC136621.1-201ENST00000624017 2304 ntBASIC17.09■□□□□ 0.33
CCDC66A2RUB6 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms