Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 KRT17P6-201ENST00000453795 1220 ntBASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 AL121772.3-201ENST00000610840 674 ntBASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 MST1P2-201ENST00000457982 2291 ntBASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15□□□□□ -0.01
LRCH1Q9Y2L9 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 LINC01711-201ENST00000598340 967 ntBASIC15□□□□□ -0.01
LRCH1Q9Y2L9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 AC012313.10-201ENST00000623509 926 ntBASIC15□□□□□ -0.01
LRCH1Q9Y2L9 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH1Q9Y2L9 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.99□□□□□ -0.01
LRCH1Q9Y2L9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms