Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGC3Q9UN70 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGC3Q9UN70 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGC3Q9UN70 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGC3Q9UN70 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 AC148477.4-201ENST00000613430 1793 ntBASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 MIR770-201ENST00000390219 98 ntBASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 AC104794.3-201ENST00000566840 1248 ntBASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 AC025181.2-201ENST00000606994 802 ntBASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC3Q9UN70 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGC3Q9UN70 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 AC023024.2-201ENST00000623561 1993 ntBASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 UGT1A2P-201ENST00000454886 866 ntBASIC16.49■□□□□ 0.23
PCDHGC3Q9UN70 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms