Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCDNQ9UBB6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCDNQ9UBB6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 KRT18P64-201ENST00000434946 1219 ntBASIC15.52■□□□□ 0.08
NCDNQ9UBB6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 EEF1DP6-201ENST00000449232 372 ntBASIC15.52■□□□□ 0.08
NCDNQ9UBB6 AL590640.2-201ENST00000457038 527 ntBASIC15.52■□□□□ 0.08
NCDNQ9UBB6 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.52■□□□□ 0.08
NCDNQ9UBB6 RNA5SP486-201ENST00000515961 83 ntBASIC15.52■□□□□ 0.08
NCDNQ9UBB6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 AC145423.3-201ENST00000615987 467 ntBASIC15.52■□□□□ 0.08
NCDNQ9UBB6 AP003419.4-201ENST00000616071 517 ntBASIC15.52■□□□□ 0.08
NCDNQ9UBB6 AC091544.8-201ENST00000619490 361 ntBASIC15.52■□□□□ 0.08
NCDNQ9UBB6 AC079336.7-201ENST00000623428 1078 ntBASIC15.52■□□□□ 0.08
NCDNQ9UBB6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.52■□□□□ 0.08
NCDNQ9UBB6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCDNQ9UBB6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCDNQ9UBB6 AC018735.1-201ENST00000437208 1502 ntBASIC15.52■□□□□ 0.07
NCDNQ9UBB6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NCDNQ9UBB6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
NCDNQ9UBB6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCDNQ9UBB6 FLJ38576-201ENST00000623820 2459 ntBASIC15.52■□□□□ 0.07
NCDNQ9UBB6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.52■□□□□ 0.07
NCDNQ9UBB6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NCDNQ9UBB6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCDNQ9UBB6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.52■□□□□ 0.07
NCDNQ9UBB6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCDNQ9UBB6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCDNQ9UBB6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NCDNQ9UBB6 AL691432.1-201ENST00000596308 1422 ntBASIC15.51■□□□□ 0.07
NCDNQ9UBB6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.51■□□□□ 0.07
NCDNQ9UBB6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 PCDHB17P-201ENST00000539533 2393 ntBASIC15.51■□□□□ 0.07
NCDNQ9UBB6 PCDHB19P-201ENST00000570871 2371 ntBASIC15.51■□□□□ 0.07
NCDNQ9UBB6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 AL354989.2-201ENST00000435838 1540 ntBASIC15.51■□□□□ 0.07
NCDNQ9UBB6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.51■□□□□ 0.07
NCDNQ9UBB6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NCDNQ9UBB6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NCDNQ9UBB6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.5■□□□□ 0.07
NCDNQ9UBB6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NCDNQ9UBB6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.5■□□□□ 0.07
NCDNQ9UBB6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NCDNQ9UBB6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NCDNQ9UBB6 AC006480.2-201ENST00000609770 1337 ntBASIC15.5■□□□□ 0.07
NCDNQ9UBB6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NCDNQ9UBB6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NCDNQ9UBB6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NCDNQ9UBB6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms