Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 AC021097.1-201ENST00000607902 574 ntBASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 ME2P1-201ENST00000426028 1970 ntBASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
CALCOCO1Q9P1Z2 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CALCOCO1Q9P1Z2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CALCOCO1Q9P1Z2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CALCOCO1Q9P1Z2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CALCOCO1Q9P1Z2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.27■□□□□ 0.35
CALCOCO1Q9P1Z2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CALCOCO1Q9P1Z2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CALCOCO1Q9P1Z2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CALCOCO1Q9P1Z2 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CALCOCO1Q9P1Z2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.27■□□□□ 0.35
CALCOCO1Q9P1Z2 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CALCOCO1Q9P1Z2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CALCOCO1Q9P1Z2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 AL596087.1-201ENST00000400979 1969 ntBASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 AC002056.1-201ENST00000395613 760 ntBASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 AL355306.1-201ENST00000415580 579 ntBASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 AC112191.1-201ENST00000523689 701 ntBASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 AC004449.1-201ENST00000564240 433 ntBASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CALCOCO1Q9P1Z2 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 REXO1L2P-201ENST00000425429 2069 ntBASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 AC010327.5-201ENST00000586923 3061 ntBASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 FAM8A3P-201ENST00000427218 844 ntBASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms