Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PARPBPQ9NWS1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PARPBPQ9NWS1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.13□□□□□ -0.15
PARPBPQ9NWS1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.13□□□□□ -0.15
PARPBPQ9NWS1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 AC024909.3-201ENST00000611513 2257 ntBASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 AC099063.4-201ENST00000641099 1602 ntBASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 AL355385.1-201ENST00000606123 409 ntBASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.12□□□□□ -0.15
PARPBPQ9NWS1 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 C8orf49-201ENST00000525043 1968 ntBASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms