Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CISHQ9NSE2 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.71■□□□□ 0.27
CISHQ9NSE2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CISHQ9NSE2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
CISHQ9NSE2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 AC022532.1-201ENST00000624563 1728 ntBASIC16.7■□□□□ 0.26
CISHQ9NSE2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 AC013268.4-201ENST00000637413 2228 ntBASIC16.7■□□□□ 0.26
CISHQ9NSE2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 AC112693.3-201ENST00000624819 1983 ntBASIC16.7■□□□□ 0.26
CISHQ9NSE2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 AC236430.1-201ENST00000402231 743 ntBASIC16.7■□□□□ 0.26
CISHQ9NSE2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 MIR4745-201ENST00000577608 62 ntBASIC16.7■□□□□ 0.26
CISHQ9NSE2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 LINC02560-201ENST00000596379 459 ntBASIC16.7■□□□□ 0.26
CISHQ9NSE2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.7■□□□□ 0.26
CISHQ9NSE2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CISHQ9NSE2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 AC002472.2-201ENST00000442739 958 ntBASIC16.69■□□□□ 0.26
CISHQ9NSE2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 AC008761.3-201ENST00000624803 892 ntBASIC16.69■□□□□ 0.26
CISHQ9NSE2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 C18orf15-201ENST00000623680 2534 ntBASIC16.69■□□□□ 0.26
CISHQ9NSE2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.69■□□□□ 0.26
CISHQ9NSE2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CISHQ9NSE2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 CLK3P2-201ENST00000427566 1453 ntBASIC16.68■□□□□ 0.26
CISHQ9NSE2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms