Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 AC011467.4-201ENST00000594891 528 ntBASIC13.79□□□□□ -0.2
CDH20Q9HBT6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.78□□□□□ -0.2
CDH20Q9HBT6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 INGX-202ENST00000489074 768 ntBASIC13.78□□□□□ -0.2
CDH20Q9HBT6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 SDHAP3-202ENST00000515467 728 ntBASIC13.78□□□□□ -0.2
CDH20Q9HBT6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 AL512361.1-201ENST00000554200 418 ntBASIC13.78□□□□□ -0.2
CDH20Q9HBT6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 AC099063.4-201ENST00000641099 1602 ntBASIC13.78□□□□□ -0.2
CDH20Q9HBT6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 AL365203.3-201ENST00000609742 2057 ntBASIC13.78□□□□□ -0.2
CDH20Q9HBT6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CDH20Q9HBT6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.77□□□□□ -0.2
CDH20Q9HBT6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDH20Q9HBT6 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.77□□□□□ -0.2
CDH20Q9HBT6 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CDH20Q9HBT6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDH20Q9HBT6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.77□□□□□ -0.2
CDH20Q9HBT6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDH20Q9HBT6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDH20Q9HBT6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms