Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 BX842568.4-201ENST00000421222 227 ntBASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 AC018529.1-201ENST00000613063 361 ntBASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 AC023024.2-201ENST00000623561 1993 ntBASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 AGAP7P-201ENST00000582299 2062 ntBASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 AGAP14-201ENST00000624701 2060 ntBASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 FAM58DP-201ENST00000428076 619 ntBASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 BANF1P1-201ENST00000553684 263 ntBASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 AL513210.1-201ENST00000629608 234 ntBASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 MYO15B-237ENST00000642007 4893 ntBASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.12■□□□□ 0.01
LRTM1Q9HBL6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 MIR1233-2-201ENST00000408138 82 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms