Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 TARDBPP1-201ENST00000442013 1203 ntBASIC18.28■□□□□ 0.52
EFCC1Q9HA90 EEF1DP4-201ENST00000446006 880 ntBASIC18.28■□□□□ 0.52
EFCC1Q9HA90 AC012441.1-201ENST00000446669 685 ntBASIC18.28■□□□□ 0.52
EFCC1Q9HA90 AKR7A2P1-201ENST00000460134 915 ntBASIC18.28■□□□□ 0.52
EFCC1Q9HA90 RPL13AP25-201ENST00000484130 612 ntBASIC18.28■□□□□ 0.52
EFCC1Q9HA90 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 ACTG1P17-201ENST00000558391 1119 ntBASIC18.28■□□□□ 0.52
EFCC1Q9HA90 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 PCDHA14-201ENST00000506751 2298 ntBASIC18.28■□□□□ 0.52
EFCC1Q9HA90 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 HLA-A-202ENST00000376806 1854 ntBASIC18.27■□□□□ 0.52
EFCC1Q9HA90 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 AC023310.1-201ENST00000554836 735 ntBASIC18.27■□□□□ 0.52
EFCC1Q9HA90 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCC1Q9HA90 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.27■□□□□ 0.51
EFCC1Q9HA90 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EFCC1Q9HA90 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
EFCC1Q9HA90 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
EFCC1Q9HA90 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
EFCC1Q9HA90 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
EFCC1Q9HA90 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 AC106760.1-201ENST00000508690 800 ntBASIC18.26■□□□□ 0.51
EFCC1Q9HA90 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 CLUHP6-201ENST00000580789 941 ntBASIC18.26■□□□□ 0.51
EFCC1Q9HA90 AL049840.4-201ENST00000602422 811 ntBASIC18.26■□□□□ 0.51
EFCC1Q9HA90 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 AC078925.2-201ENST00000624013 1973 ntBASIC18.26■□□□□ 0.51
EFCC1Q9HA90 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCC1Q9HA90 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 963.7 ms