Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.22■□□□□ 0.03
LIN28AQ9H9Z2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.22■□□□□ 0.03
LIN28AQ9H9Z2 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LIN28AQ9H9Z2 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LIN28AQ9H9Z2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.22■□□□□ 0.03
LIN28AQ9H9Z2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LIN28AQ9H9Z2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 AL365209.1-201ENST00000624418 6473 ntBASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 AC008677.1-201ENST00000519230 1561 ntBASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 LINC00552-201ENST00000625151 2579 ntBASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 SPDYE14P-201ENST00000442619 822 ntBASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 LINC02447-202ENST00000501888 2146 ntBASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 ALG1L8P-201ENST00000533887 760 ntBASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 AC025678.2-201ENST00000562061 970 ntBASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.21■□□□□ 0.03
LIN28AQ9H9Z2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LIN28AQ9H9Z2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LIN28AQ9H9Z2 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.21■□□□□ 0.02
LIN28AQ9H9Z2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
LIN28AQ9H9Z2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LIN28AQ9H9Z2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
LIN28AQ9H9Z2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LIN28AQ9H9Z2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 AC005622.1-201ENST00000636801 1703 ntBASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 AP3S2-216ENST00000617003 1561 ntBASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 RFPL4AP1-201ENST00000530883 850 ntBASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 AC073389.1-201ENST00000595595 795 ntBASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN28AQ9H9Z2 AC093512.1-201ENST00000617969 520 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms