Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 AL589702.1-201ENST00000641229 1509 ntBASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.6■□□□□ 0.25
RHOXF2Q9BQY4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 RN7SL850P-201ENST00000579959 291 ntBASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.59■□□□□ 0.25
RHOXF2Q9BQY4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RHOXF2Q9BQY4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.58■□□□□ 0.25
RHOXF2Q9BQY4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RHOXF2Q9BQY4 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RHOXF2Q9BQY4 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.58■□□□□ 0.25
RHOXF2Q9BQY4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RHOXF2Q9BQY4 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 AC006557.2-201ENST00000592985 1240 ntBASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 AL355877.3-201ENST00000622820 899 ntBASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 AC066615.1-201ENST00000640911 628 ntBASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RHOXF2Q9BQY4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RHOXF2Q9BQY4 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms