Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 POU5F1P6-201ENST00000466990 990 ntBASIC14.67□□□□□ -0.06
TM9SF2Q99805 AC098859.1-201ENST00000502915 1238 ntBASIC14.67□□□□□ -0.06
TM9SF2Q99805 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 IGHV3-42-201ENST00000520410 361 ntBASIC14.67□□□□□ -0.06
TM9SF2Q99805 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 AP3S2-216ENST00000617003 1561 ntBASIC14.67□□□□□ -0.06
TM9SF2Q99805 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.67□□□□□ -0.06
TM9SF2Q99805 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 FAM220BP-201ENST00000377689 816 ntBASIC14.66□□□□□ -0.06
TM9SF2Q99805 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 BCRP1-201ENST00000444246 691 ntBASIC14.66□□□□□ -0.06
TM9SF2Q99805 INGX-202ENST00000489074 768 ntBASIC14.66□□□□□ -0.06
TM9SF2Q99805 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 MIR4453-201ENST00000584019 89 ntBASIC14.66□□□□□ -0.06
TM9SF2Q99805 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 FAM45BP-202ENST00000592932 1624 ntBASIC14.66□□□□□ -0.06
TM9SF2Q99805 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF2Q99805 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
TM9SF2Q99805 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 AL009178.2-201ENST00000597278 2719 ntBASIC14.65□□□□□ -0.06
TM9SF2Q99805 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF2Q99805 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF2Q99805 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF2Q99805 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF2Q99805 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF2Q99805 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 AL353705.2-201ENST00000428243 662 ntBASIC14.65□□□□□ -0.06
TM9SF2Q99805 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms