Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC022494.1-201ENST00000466044 728 ntBASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 AC009486.1-201ENST00000569860 813 ntBASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC85AQ96PX6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC85AQ96PX6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC85AQ96PX6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC85AQ96PX6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
CCDC85AQ96PX6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC85AQ96PX6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 AL603832.2-201ENST00000566195 2125 ntBASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 AL583810.1-201ENST00000553344 1045 ntBASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 AC092127.1-201ENST00000567093 3455 ntBASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC85AQ96PX6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 AL133267.1-201ENST00000398220 340 ntBASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 RPL7P3-201ENST00000441388 714 ntBASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms