Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 AL121723.1-201ENST00000445194 1519 ntBASIC16.16■□□□□ 0.18
RPRD1AQ96P16 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 RN7SL399P-201ENST00000471648 279 ntBASIC16.16■□□□□ 0.18
RPRD1AQ96P16 AC104596.2-201ENST00000512793 793 ntBASIC16.16■□□□□ 0.18
RPRD1AQ96P16 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 AC127383.1-201ENST00000444697 1800 ntBASIC16.15■□□□□ 0.18
RPRD1AQ96P16 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 MYCLP2-201ENST00000449268 967 ntBASIC16.15■□□□□ 0.18
RPRD1AQ96P16 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.15■□□□□ 0.18
RPRD1AQ96P16 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.15■□□□□ 0.18
RPRD1AQ96P16 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RPRD1AQ96P16 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RPRD1AQ96P16 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RPRD1AQ96P16 AC007950.2-201ENST00000615045 2347 ntBASIC16.14■□□□□ 0.18
RPRD1AQ96P16 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 AC067930.6-201ENST00000623257 4947 ntBASIC16.14■□□□□ 0.17
RPRD1AQ96P16 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms