Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC007950.2-201ENST00000615045 2347 ntBASIC18.35■□□□□ 0.53
TRIM47Q96LD4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 AC068587.3-201ENST00000526613 355 ntBASIC18.35■□□□□ 0.53
TRIM47Q96LD4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 BRI3BPP1-201ENST00000594224 787 ntBASIC18.35■□□□□ 0.53
TRIM47Q96LD4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM47Q96LD4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 AC006449.6-201ENST00000612330 2296 ntBASIC18.34■□□□□ 0.53
TRIM47Q96LD4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 AC132872.4-202ENST00000622924 2756 ntBASIC18.34■□□□□ 0.53
TRIM47Q96LD4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 PTP4A1P2-201ENST00000546033 454 ntBASIC18.34■□□□□ 0.53
TRIM47Q96LD4 RHOQP1-201ENST00000555758 579 ntBASIC18.34■□□□□ 0.53
TRIM47Q96LD4 C2orf69P2-201ENST00000562032 1123 ntBASIC18.34■□□□□ 0.53
TRIM47Q96LD4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
TRIM47Q96LD4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM47Q96LD4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 RPL13P2-201ENST00000440687 659 ntBASIC18.33■□□□□ 0.52
TRIM47Q96LD4 RPL13AP20-201ENST00000459725 609 ntBASIC18.33■□□□□ 0.52
TRIM47Q96LD4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 AC010328.2-201ENST00000597698 1111 ntBASIC18.33■□□□□ 0.52
TRIM47Q96LD4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 AC009542.2-202ENST00000619004 1067 ntBASIC18.33■□□□□ 0.52
TRIM47Q96LD4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms