Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS3Q969F9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS3Q969F9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
HPS3Q969F9 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS3Q969F9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS3Q969F9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS3Q969F9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.39■□□□□ 0.37
HPS3Q969F9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS3Q969F9 AC087499.5-201ENST00000452760 1342 ntBASIC17.39■□□□□ 0.37
HPS3Q969F9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS3Q969F9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HPS3Q969F9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HPS3Q969F9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS3Q969F9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.39■□□□□ 0.37
HPS3Q969F9 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.39■□□□□ 0.37
HPS3Q969F9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.38■□□□□ 0.37
HPS3Q969F9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.38■□□□□ 0.37
HPS3Q969F9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.38■□□□□ 0.37
HPS3Q969F9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HPS3Q969F9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HPS3Q969F9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.38■□□□□ 0.37
HPS3Q969F9 AC055876.3-201ENST00000431496 288 ntBASIC17.38■□□□□ 0.37
HPS3Q969F9 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.38■□□□□ 0.37
HPS3Q969F9 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.38■□□□□ 0.37
HPS3Q969F9 SPDYE18-201ENST00000510091 1050 ntBASIC17.38■□□□□ 0.37
HPS3Q969F9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.38■□□□□ 0.37
HPS3Q969F9 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.38■□□□□ 0.37
HPS3Q969F9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HPS3Q969F9 AC138649.4-201ENST00000612222 287 ntBASIC17.38■□□□□ 0.37
HPS3Q969F9 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
HPS3Q969F9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.38■□□□□ 0.37
HPS3Q969F9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.38■□□□□ 0.37
HPS3Q969F9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HPS3Q969F9 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.38■□□□□ 0.37
HPS3Q969F9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HPS3Q969F9 CICP11-201ENST00000434745 2827 ntBASIC17.38■□□□□ 0.37
HPS3Q969F9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS3Q969F9 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.38■□□□□ 0.37
HPS3Q969F9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
HPS3Q969F9 LINC02228-204ENST00000642115 2962 ntBASIC17.37■□□□□ 0.37
HPS3Q969F9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HPS3Q969F9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.37■□□□□ 0.37
HPS3Q969F9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HPS3Q969F9 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.37■□□□□ 0.37
HPS3Q969F9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.37■□□□□ 0.37
HPS3Q969F9 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.37■□□□□ 0.37
HPS3Q969F9 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HPS3Q969F9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.37■□□□□ 0.37
HPS3Q969F9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.37■□□□□ 0.37
HPS3Q969F9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.37■□□□□ 0.37
HPS3Q969F9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.37■□□□□ 0.37
HPS3Q969F9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.37■□□□□ 0.37
HPS3Q969F9 AC005498.2-205ENST00000593218 784 ntBASIC17.37■□□□□ 0.37
HPS3Q969F9 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.37■□□□□ 0.37
HPS3Q969F9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
HPS3Q969F9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.37■□□□□ 0.37
HPS3Q969F9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.37■□□□□ 0.37
HPS3Q969F9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HPS3Q969F9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.37■□□□□ 0.37
HPS3Q969F9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
HPS3Q969F9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.37■□□□□ 0.37
HPS3Q969F9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.37■□□□□ 0.37
HPS3Q969F9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS3Q969F9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
HPS3Q969F9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms