Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
AP3S1Q92572 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.9□□□□□ -0.19
AP3S1Q92572 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
AP3S1Q92572 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S1Q92572 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S1Q92572 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S1Q92572 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.89□□□□□ -0.19
AP3S1Q92572 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
AP3S1Q92572 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
AP3S1Q92572 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.89□□□□□ -0.19
AP3S1Q92572 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
AP3S1Q92572 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S1Q92572 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
AP3S1Q92572 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
AP3S1Q92572 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S1Q92572 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
AP3S1Q92572 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.89□□□□□ -0.19
AP3S1Q92572 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S1Q92572 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
AP3S1Q92572 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.89□□□□□ -0.19
AP3S1Q92572 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S1Q92572 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.89□□□□□ -0.19
AP3S1Q92572 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.89□□□□□ -0.19
AP3S1Q92572 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.89□□□□□ -0.19
AP3S1Q92572 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S1Q92572 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.89□□□□□ -0.19
AP3S1Q92572 MIR3909-201ENST00000579518 119 ntBASIC13.89□□□□□ -0.19
AP3S1Q92572 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
AP3S1Q92572 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.89□□□□□ -0.19
AP3S1Q92572 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.89□□□□□ -0.19
AP3S1Q92572 AL139288.1-201ENST00000623748 933 ntBASIC13.89□□□□□ -0.19
AP3S1Q92572 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
AP3S1Q92572 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S1Q92572 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.89□□□□□ -0.19
AP3S1Q92572 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
AP3S1Q92572 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.89□□□□□ -0.19
AP3S1Q92572 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S1Q92572 AP005117.1-201ENST00000584346 1413 ntBASIC13.89□□□□□ -0.19
AP3S1Q92572 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP3S1Q92572 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.89□□□□□ -0.19
AP3S1Q92572 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.89□□□□□ -0.19
AP3S1Q92572 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.89□□□□□ -0.19
AP3S1Q92572 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.88□□□□□ -0.19
AP3S1Q92572 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.88□□□□□ -0.19
AP3S1Q92572 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.88□□□□□ -0.19
AP3S1Q92572 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.88□□□□□ -0.19
AP3S1Q92572 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.88□□□□□ -0.19
AP3S1Q92572 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
AP3S1Q92572 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
AP3S1Q92572 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.88□□□□□ -0.19
AP3S1Q92572 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
AP3S1Q92572 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.88□□□□□ -0.19
AP3S1Q92572 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.88□□□□□ -0.19
AP3S1Q92572 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
AP3S1Q92572 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
AP3S1Q92572 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.88□□□□□ -0.19
AP3S1Q92572 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
AP3S1Q92572 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.88□□□□□ -0.19
AP3S1Q92572 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.88□□□□□ -0.19
AP3S1Q92572 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
AP3S1Q92572 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.88□□□□□ -0.19
AP3S1Q92572 KRT18P1-202ENST00000452408 1331 ntBASIC13.88□□□□□ -0.19
AP3S1Q92572 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S1Q92572 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
AP3S1Q92572 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
AP3S1Q92572 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
AP3S1Q92572 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
AP3S1Q92572 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms