Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 MIR770-201ENST00000390219 98 ntBASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 AC107890.1-201ENST00000422478 521 ntBASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 AC097493.3-201ENST00000509725 367 ntBASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 HNRNPUP1-201ENST00000554987 333 ntBASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 AL390955.2-201ENST00000603032 514 ntBASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 AL450472.2-201ENST00000603663 1156 ntBASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 AC097359.3-201ENST00000603982 1210 ntBASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 AC093512.1-201ENST00000617969 520 ntBASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 CETN4P-206ENST00000642099 2168 ntBASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 AL137784.3-201ENST00000623858 2288 ntBASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 FAM86GP-201ENST00000448322 971 ntBASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 AC140878.1-201ENST00000565277 250 ntBASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 TEX28P1-201ENST00000613479 1221 ntBASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 TEX28P2-201ENST00000617764 1221 ntBASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 AC073347.1-201ENST00000421633 2643 ntBASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.84□□□□□ -0.03
SIMC1Q8NDZ2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.83□□□□□ -0.03
SIMC1Q8NDZ2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SIMC1Q8NDZ2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
SIMC1Q8NDZ2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SIMC1Q8NDZ2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SIMC1Q8NDZ2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.83□□□□□ -0.03
SIMC1Q8NDZ2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SIMC1Q8NDZ2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SIMC1Q8NDZ2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms