Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 TIMM8BP1-201ENST00000452384 211 ntBASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 AC040169.1-201ENST00000565382 521 ntBASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 AC026120.1-201ENST00000611536 926 ntBASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 AC243562.1-201ENST00000560672 389 ntBASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 AP000842.3-202ENST00000569238 1080 ntBASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 AC006486.2-201ENST00000624246 2199 ntBASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 AL136982.4-201ENST00000437689 1740 ntBASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 AC009090.5-201ENST00000624886 2285 ntBASIC16.65■□□□□ 0.26
CCDC50Q8IVM0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCDC50Q8IVM0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms