Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
LYSMD2Q8IV50 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
LYSMD2Q8IV50 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
LYSMD2Q8IV50 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
LYSMD2Q8IV50 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LYSMD2Q8IV50 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LYSMD2Q8IV50 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 AP005117.1-201ENST00000584346 1413 ntBASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 TOB2P1-201ENST00000469761 992 ntBASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 BX005266.1-201ENST00000473402 457 ntBASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 MIR5100-201ENST00000579544 119 ntBASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 ACE3P-201ENST00000423435 1973 ntBASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD2Q8IV50 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 AL591122.2-201ENST00000624125 1853 ntBASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 AP002383.4-201ENST00000442518 975 ntBASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms