Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 AC013726.1-201ENST00000563747 2285 ntBASIC16.29■□□□□ 0.2
CCDC25Q86WR0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 AC009947.1-201ENST00000444350 727 ntBASIC16.29■□□□□ 0.2
CCDC25Q86WR0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 AC007064.4-201ENST00000637740 555 ntBASIC16.29■□□□□ 0.2
CCDC25Q86WR0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 AC126365.1-201ENST00000578585 1514 ntBASIC16.29■□□□□ 0.2
CCDC25Q86WR0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC25Q86WR0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 RHOQP3-201ENST00000437982 621 ntBASIC16.28■□□□□ 0.2
CCDC25Q86WR0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 MIR7706-201ENST00000613747 67 ntBASIC16.28■□□□□ 0.2
CCDC25Q86WR0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC25Q86WR0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC25Q86WR0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms