Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 AC013726.1-201ENST00000563747 2285 ntBASIC14.26□□□□□ -0.13
SHFQ7M4L6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 AC005089.1-201ENST00000619486 2241 ntBASIC14.26□□□□□ -0.13
SHFQ7M4L6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 AC074386.1-202ENST00000463561 864 ntBASIC14.26□□□□□ -0.13
SHFQ7M4L6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 AC148477.4-201ENST00000613430 1793 ntBASIC14.26□□□□□ -0.13
SHFQ7M4L6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SHFQ7M4L6 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 AC104109.2-201ENST00000602919 1418 ntBASIC14.25□□□□□ -0.13
SHFQ7M4L6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 OR2I1P-209ENST00000641730 5365 ntBASIC14.25□□□□□ -0.13
SHFQ7M4L6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 AC104581.4-201ENST00000623126 3052 ntBASIC14.25□□□□□ -0.13
SHFQ7M4L6 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 AC112191.1-201ENST00000523689 701 ntBASIC14.25□□□□□ -0.13
SHFQ7M4L6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 AC034105.1-201ENST00000563488 319 ntBASIC14.25□□□□□ -0.13
SHFQ7M4L6 AC018845.2-201ENST00000568326 409 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms