Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 MIR662-201ENST00000384847 95 ntBASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 AL671277.2-201ENST00000458060 996 ntBASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 U82695.1-201ENST00000635752 1889 ntBASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 AL928921.2-201ENST00000641325 2442 ntBASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP4Q6PIL6 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 FAM8A3P-201ENST00000427218 844 ntBASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 AC022616.7-201ENST00000525383 220 ntBASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 AC073508.3-201ENST00000619697 1419 ntBASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.24□□□□□ -0.45
KCNIP4Q6PIL6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms