Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 AP000347.1-202ENST00000435868 847 ntBASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 MTDHP5-201ENST00000598980 586 ntBASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 BEND3P1-201ENST00000421591 1944 ntBASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TMEM53Q6P2H8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 GPAA1P2-202ENST00000606848 1787 ntBASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 AL031731.1-201ENST00000642131 2094 ntBASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM53Q6P2H8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms