Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 MRPS18AP1-201ENST00000414458 589 ntBASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 AC114501.2-201ENST00000439631 535 ntBASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 BCRP1-201ENST00000444246 691 ntBASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 MIR4313-201ENST00000580760 101 ntBASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LDLRAP1Q5SW96 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 AL607033.1-201ENST00000623900 1599 ntBASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 HMGN1P19-201ENST00000436976 333 ntBASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 AC135586.1-201ENST00000539323 574 ntBASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 AC008738.7-201ENST00000609744 511 ntBASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms