Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 PTP4A1P2-201ENST00000546033 454 ntBASIC21.5■■□□□ 1.03
CDCA8Q53HL2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDCA8Q53HL2 AC090616.6-203ENST00000579186 1945 ntBASIC21.49■■□□□ 1.03
CDCA8Q53HL2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 U91328.1-201ENST00000437528 223 ntBASIC21.49■■□□□ 1.03
CDCA8Q53HL2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 AC008735.3-201ENST00000596646 500 ntBASIC21.49■■□□□ 1.03
CDCA8Q53HL2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 HLA-DQB2-231ENST00000435145 2026 ntBASIC21.49■■□□□ 1.03
CDCA8Q53HL2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 AC020658.6-201ENST00000623564 1870 ntBASIC21.49■■□□□ 1.03
CDCA8Q53HL2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CDCA8Q53HL2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 NUS1P3-201ENST00000423502 862 ntBASIC21.48■■□□□ 1.03
CDCA8Q53HL2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 TDH-203ENST00000531764 1110 ntBASIC21.48■■□□□ 1.03
CDCA8Q53HL2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 AC008894.3-201ENST00000624324 3103 ntBASIC21.48■■□□□ 1.03
CDCA8Q53HL2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDCA8Q53HL2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 AL645937.2-201ENST00000396808 931 ntBASIC21.47■■□□□ 1.03
CDCA8Q53HL2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 AC004066.1-201ENST00000502488 802 ntBASIC21.47■■□□□ 1.03
CDCA8Q53HL2 USP32P1-208ENST00000506594 1164 ntBASIC21.47■■□□□ 1.03
CDCA8Q53HL2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms