Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 AC073621.1-201ENST00000392730 636 ntBASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 OR7E47P-204ENST00000575924 449 ntBASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 AL121894.2-201ENST00000602977 491 ntBASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ANKRD55Q3KP44 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 AL645939.2-201ENST00000427340 991 ntBASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 FAM185BP-201ENST00000443595 716 ntBASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 AC079781.3-201ENST00000449110 356 ntBASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 RNPS1P1-201ENST00000507437 918 ntBASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 IGHV3-65-201ENST00000523210 341 ntBASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 AC002347.1-201ENST00000569543 541 ntBASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 AC107918.4-202ENST00000641623 219 ntBASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 OR2I1P-209ENST00000641730 5365 ntBASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms