Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.94□□□□□ -0.02
SKP1P63208 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
SKP1P63208 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SKP1P63208 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.94□□□□□ -0.02
SKP1P63208 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.94□□□□□ -0.02
SKP1P63208 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.94□□□□□ -0.02
SKP1P63208 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SKP1P63208 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SKP1P63208 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.94□□□□□ -0.02
SKP1P63208 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.94□□□□□ -0.02
SKP1P63208 AC087499.6-201ENST00000411576 835 ntBASIC14.94□□□□□ -0.02
SKP1P63208 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.94□□□□□ -0.02
SKP1P63208 MRPS18AP1-201ENST00000414458 589 ntBASIC14.94□□□□□ -0.02
SKP1P63208 TOMM22P5-201ENST00000416399 439 ntBASIC14.94□□□□□ -0.02
SKP1P63208 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.94□□□□□ -0.02
SKP1P63208 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.94□□□□□ -0.02
SKP1P63208 RPL13P2-201ENST00000440687 659 ntBASIC14.94□□□□□ -0.02
SKP1P63208 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.94□□□□□ -0.02
SKP1P63208 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.94□□□□□ -0.02
SKP1P63208 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.94□□□□□ -0.02
SKP1P63208 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.94□□□□□ -0.02
SKP1P63208 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.94□□□□□ -0.02
SKP1P63208 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.94□□□□□ -0.02
SKP1P63208 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.94□□□□□ -0.02
SKP1P63208 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.94□□□□□ -0.02
SKP1P63208 AC104794.3-201ENST00000566840 1248 ntBASIC14.94□□□□□ -0.02
SKP1P63208 RRP7BP-205ENST00000566851 833 ntBASIC14.94□□□□□ -0.02
SKP1P63208 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.94□□□□□ -0.02
SKP1P63208 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SKP1P63208 SRD5A3P1-201ENST00000603021 949 ntBASIC14.94□□□□□ -0.02
SKP1P63208 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.94□□□□□ -0.02
SKP1P63208 AC008761.3-201ENST00000624803 892 ntBASIC14.94□□□□□ -0.02
SKP1P63208 PCDHA1-201ENST00000378133 2726 ntBASIC14.94□□□□□ -0.02
SKP1P63208 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.94□□□□□ -0.02
SKP1P63208 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.94□□□□□ -0.02
SKP1P63208 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.94□□□□□ -0.02
SKP1P63208 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.94□□□□□ -0.02
SKP1P63208 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
SKP1P63208 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SKP1P63208 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.93□□□□□ -0.02
SKP1P63208 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 AC018892.3-201ENST00000623986 2499 ntBASIC14.93□□□□□ -0.02
SKP1P63208 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.93□□□□□ -0.02
SKP1P63208 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.93□□□□□ -0.02
SKP1P63208 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SKP1P63208 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.93□□□□□ -0.02
SKP1P63208 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SKP1P63208 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
SKP1P63208 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
SKP1P63208 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SKP1P63208 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.93□□□□□ -0.02
SKP1P63208 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.93□□□□□ -0.02
SKP1P63208 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.93□□□□□ -0.02
SKP1P63208 DFFBP1-201ENST00000433250 979 ntBASIC14.93□□□□□ -0.02
SKP1P63208 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.93□□□□□ -0.02
SKP1P63208 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
SKP1P63208 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SKP1P63208 AC036164.1-201ENST00000570544 333 ntBASIC14.93□□□□□ -0.02
SKP1P63208 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.93□□□□□ -0.02
SKP1P63208 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.93□□□□□ -0.02
SKP1P63208 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.93□□□□□ -0.02
SKP1P63208 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.93□□□□□ -0.02
SKP1P63208 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.93□□□□□ -0.02
SKP1P63208 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.93□□□□□ -0.02
SKP1P63208 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
SKP1P63208 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SKP1P63208 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SKP1P63208 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms