Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.53■□□□□ 0.24
USP46P62068 AC036164.1-201ENST00000570544 333 ntBASIC16.53■□□□□ 0.24
USP46P62068 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.53■□□□□ 0.24
USP46P62068 AC010326.4-201ENST00000604665 891 ntBASIC16.53■□□□□ 0.24
USP46P62068 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.53■□□□□ 0.24
USP46P62068 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.53■□□□□ 0.24
USP46P62068 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
USP46P62068 DBET-201ENST00000630918 3363 ntBASIC16.53■□□□□ 0.24
USP46P62068 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.53■□□□□ 0.24
USP46P62068 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
USP46P62068 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.53■□□□□ 0.24
USP46P62068 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
USP46P62068 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.53■□□□□ 0.24
USP46P62068 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.53■□□□□ 0.24
USP46P62068 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
USP46P62068 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP46P62068 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.52■□□□□ 0.24
USP46P62068 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
USP46P62068 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
USP46P62068 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.52■□□□□ 0.24
USP46P62068 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP46P62068 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP46P62068 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP46P62068 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP46P62068 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USP46P62068 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP46P62068 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP46P62068 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
USP46P62068 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP46P62068 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.52■□□□□ 0.24
USP46P62068 FAM86LP-201ENST00000478302 853 ntBASIC16.52■□□□□ 0.24
USP46P62068 GIMAP3P-201ENST00000495150 836 ntBASIC16.52■□□□□ 0.24
USP46P62068 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.52■□□□□ 0.24
USP46P62068 AC104596.2-201ENST00000512793 793 ntBASIC16.52■□□□□ 0.24
USP46P62068 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.52■□□□□ 0.24
USP46P62068 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.52■□□□□ 0.24
USP46P62068 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.52■□□□□ 0.23
USP46P62068 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.23
USP46P62068 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP46P62068 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP46P62068 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.52■□□□□ 0.23
USP46P62068 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP46P62068 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP46P62068 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
USP46P62068 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.51■□□□□ 0.23
USP46P62068 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.51■□□□□ 0.23
USP46P62068 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
USP46P62068 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
USP46P62068 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
USP46P62068 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.51■□□□□ 0.23
USP46P62068 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
USP46P62068 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.51■□□□□ 0.23
USP46P62068 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.51■□□□□ 0.23
USP46P62068 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.51■□□□□ 0.23
USP46P62068 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.51■□□□□ 0.23
USP46P62068 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.51■□□□□ 0.23
USP46P62068 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.51■□□□□ 0.23
USP46P62068 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.51■□□□□ 0.23
USP46P62068 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.51■□□□□ 0.23
USP46P62068 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.51■□□□□ 0.23
USP46P62068 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
USP46P62068 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
USP46P62068 AC006213.4-201ENST00000616184 634 ntBASIC16.51■□□□□ 0.23
USP46P62068 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.51■□□□□ 0.23
USP46P62068 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
USP46P62068 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
USP46P62068 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
USP46P62068 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms