Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS1BP61024 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.12□□□□□ -0.63
CKS1BP61024 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.12□□□□□ -0.63
CKS1BP61024 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CKS1BP61024 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.12□□□□□ -0.63
CKS1BP61024 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC11.12□□□□□ -0.63
CKS1BP61024 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
CKS1BP61024 BNIP3P18-201ENST00000593976 575 ntBASIC11.12□□□□□ -0.63
CKS1BP61024 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
CKS1BP61024 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.12□□□□□ -0.63
CKS1BP61024 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.12□□□□□ -0.63
CKS1BP61024 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS1BP61024 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CKS1BP61024 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.12□□□□□ -0.63
CKS1BP61024 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS1BP61024 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS1BP61024 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS1BP61024 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS1BP61024 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CKS1BP61024 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CKS1BP61024 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CKS1BP61024 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CKS1BP61024 AC079776.2-201ENST00000641154 1609 ntBASIC11.12□□□□□ -0.63
CKS1BP61024 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS1BP61024 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.12□□□□□ -0.63
CKS1BP61024 BX324167.2-201ENST00000623717 3316 ntBASIC11.12□□□□□ -0.63
CKS1BP61024 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.12□□□□□ -0.63
CKS1BP61024 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.12□□□□□ -0.63
CKS1BP61024 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS1BP61024 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CKS1BP61024 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.12□□□□□ -0.63
CKS1BP61024 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC11.11□□□□□ -0.63
CKS1BP61024 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.11□□□□□ -0.63
CKS1BP61024 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CKS1BP61024 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11.11□□□□□ -0.63
CKS1BP61024 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.11□□□□□ -0.63
CKS1BP61024 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC11.11□□□□□ -0.63
CKS1BP61024 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.11□□□□□ -0.63
CKS1BP61024 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.11□□□□□ -0.63
CKS1BP61024 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 TMPOP1-202ENST00000424642 1267 ntBASIC11.11□□□□□ -0.63
CKS1BP61024 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.11□□□□□ -0.63
CKS1BP61024 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.11□□□□□ -0.63
CKS1BP61024 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 POU5F1P6-201ENST00000466990 990 ntBASIC11.11□□□□□ -0.63
CKS1BP61024 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC11.11□□□□□ -0.63
CKS1BP61024 AP000867.3-201ENST00000524675 377 ntBASIC11.11□□□□□ -0.63
CKS1BP61024 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC11.11□□□□□ -0.63
CKS1BP61024 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC11.11□□□□□ -0.63
CKS1BP61024 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
CKS1BP61024 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
CKS1BP61024 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CKS1BP61024 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.11□□□□□ -0.63
CKS1BP61024 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CKS1BP61024 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 LINC01144-201ENST00000626198 1710 ntBASIC11.11□□□□□ -0.63
CKS1BP61024 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
CKS1BP61024 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.11□□□□□ -0.63
CKS1BP61024 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.11□□□□□ -0.63
CKS1BP61024 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.11□□□□□ -0.63
CKS1BP61024 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC11.11□□□□□ -0.63
CKS1BP61024 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
CKS1BP61024 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.11□□□□□ -0.63
CKS1BP61024 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
CKS1BP61024 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms