Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 PAUPAR-201ENST00000630360 2965 ntBASIC13.58□□□□□ -0.24
HCFC1P51610 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.57□□□□□ -0.24
HCFC1P51610 AC006001.1-201ENST00000325130 474 ntBASIC13.57□□□□□ -0.24
HCFC1P51610 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
HCFC1P51610 AC092506.1-202ENST00000401022 528 ntBASIC13.57□□□□□ -0.24
HCFC1P51610 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.57□□□□□ -0.24
HCFC1P51610 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.57□□□□□ -0.24
HCFC1P51610 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.57□□□□□ -0.24
HCFC1P51610 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.57□□□□□ -0.24
HCFC1P51610 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.57□□□□□ -0.24
HCFC1P51610 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.57□□□□□ -0.24
HCFC1P51610 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HCFC1P51610 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.57□□□□□ -0.24
HCFC1P51610 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
HCFC1P51610 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HCFC1P51610 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.57□□□□□ -0.24
HCFC1P51610 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 AC024909.3-201ENST00000611513 2257 ntBASIC13.57□□□□□ -0.24
HCFC1P51610 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.57□□□□□ -0.24
HCFC1P51610 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
HCFC1P51610 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.57□□□□□ -0.24
HCFC1P51610 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HCFC1P51610 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
HCFC1P51610 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.57□□□□□ -0.24
HCFC1P51610 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.57□□□□□ -0.24
HCFC1P51610 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.57□□□□□ -0.24
HCFC1P51610 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.57□□□□□ -0.24
HCFC1P51610 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.57□□□□□ -0.24
HCFC1P51610 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.57□□□□□ -0.24
HCFC1P51610 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
HCFC1P51610 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCFC1P51610 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
HCFC1P51610 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 HSPB1P2-201ENST00000448722 546 ntBASIC13.56□□□□□ -0.24
HCFC1P51610 AL591846.1-201ENST00000451736 433 ntBASIC13.56□□□□□ -0.24
HCFC1P51610 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.56□□□□□ -0.24
HCFC1P51610 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.56□□□□□ -0.24
HCFC1P51610 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.56□□□□□ -0.24
HCFC1P51610 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.56□□□□□ -0.24
HCFC1P51610 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.56□□□□□ -0.24
HCFC1P51610 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.56□□□□□ -0.24
HCFC1P51610 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.56□□□□□ -0.24
HCFC1P51610 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.56□□□□□ -0.24
HCFC1P51610 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.56□□□□□ -0.24
HCFC1P51610 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.56□□□□□ -0.24
HCFC1P51610 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.56□□□□□ -0.24
HCFC1P51610 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.56□□□□□ -0.24
HCFC1P51610 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.56□□□□□ -0.24
HCFC1P51610 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms