Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.96□□□□□ -0.18
LHX2P50458 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
LHX2P50458 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LHX2P50458 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LHX2P50458 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.95□□□□□ -0.18
LHX2P50458 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LHX2P50458 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LHX2P50458 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
LHX2P50458 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.95□□□□□ -0.18
LHX2P50458 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.95□□□□□ -0.18
LHX2P50458 GK-202ENST00000378941 458 ntTSL 3 BASIC13.95□□□□□ -0.18
LHX2P50458 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
LHX2P50458 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.95□□□□□ -0.18
LHX2P50458 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.95□□□□□ -0.18
LHX2P50458 ACTG1P3-201ENST00000431775 1114 ntBASIC13.95□□□□□ -0.18
LHX2P50458 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.95□□□□□ -0.18
LHX2P50458 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.95□□□□□ -0.18
LHX2P50458 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.95□□□□□ -0.18
LHX2P50458 MIR5189-201ENST00000577370 114 ntBASIC13.95□□□□□ -0.18
LHX2P50458 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.95□□□□□ -0.18
LHX2P50458 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.95□□□□□ -0.18
LHX2P50458 AL162274.1-201ENST00000617191 1098 ntBASIC13.95□□□□□ -0.18
LHX2P50458 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.95□□□□□ -0.18
LHX2P50458 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.95□□□□□ -0.18
LHX2P50458 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 AC084364.1-201ENST00000551967 1556 ntBASIC13.95□□□□□ -0.18
LHX2P50458 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX2P50458 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LHX2P50458 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LHX2P50458 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.94□□□□□ -0.18
LHX2P50458 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.94□□□□□ -0.18
LHX2P50458 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LHX2P50458 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.94□□□□□ -0.18
LHX2P50458 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
LHX2P50458 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.94□□□□□ -0.18
LHX2P50458 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
LHX2P50458 OR8S1-201ENST00000310194 1080 ntBASIC13.94□□□□□ -0.18
LHX2P50458 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.94□□□□□ -0.18
LHX2P50458 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.94□□□□□ -0.18
LHX2P50458 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.94□□□□□ -0.18
LHX2P50458 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.94□□□□□ -0.18
LHX2P50458 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.94□□□□□ -0.18
LHX2P50458 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.94□□□□□ -0.18
LHX2P50458 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.94□□□□□ -0.18
LHX2P50458 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.94□□□□□ -0.18
LHX2P50458 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.94□□□□□ -0.18
LHX2P50458 AC106886.1-201ENST00000568660 600 ntBASIC13.94□□□□□ -0.18
LHX2P50458 CLUHP6-201ENST00000580789 941 ntBASIC13.94□□□□□ -0.18
LHX2P50458 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LHX2P50458 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.94□□□□□ -0.18
LHX2P50458 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LHX2P50458 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.94□□□□□ -0.18
LHX2P50458 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms