Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A12P48065 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLC6A12P48065 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 AL390955.2-201ENST00000603032 514 ntBASIC15.12■□□□□ 0.01
SLC6A12P48065 AC004461.2-201ENST00000629517 803 ntBASIC15.12■□□□□ 0.01
SLC6A12P48065 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A12P48065 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A12P48065 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 BTBD7P1-201ENST00000447253 1453 ntBASIC15.12■□□□□ 0.01
SLC6A12P48065 AC138969.3-201ENST00000546612 1459 ntBASIC15.12■□□□□ 0.01
SLC6A12P48065 AC138932.2-201ENST00000548268 1459 ntBASIC15.12■□□□□ 0.01
SLC6A12P48065 AC126755.4-201ENST00000549796 1459 ntBASIC15.12■□□□□ 0.01
SLC6A12P48065 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A12P48065 MST1L-201ENST00000442552 2185 ntBASIC15.12■□□□□ 0.01
SLC6A12P48065 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SLC6A12P48065 TNRC18P2-201ENST00000417666 2714 ntBASIC15.12■□□□□ 0.01
SLC6A12P48065 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A12P48065 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC6A12P48065 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC6A12P48065 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC6A12P48065 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC6A12P48065 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 TCAF2P1-201ENST00000291129 2421 ntBASIC15.11■□□□□ 0.01
SLC6A12P48065 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC6A12P48065 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC6A12P48065 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC6A12P48065 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC6A12P48065 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC6A12P48065 AC004890.2-204ENST00000481968 304 ntBASIC15.11■□□□□ 0.01
SLC6A12P48065 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC6A12P48065 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC6A12P48065 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC6A12P48065 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC6A12P48065 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC6A12P48065 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC6A12P48065 AC093512.1-201ENST00000617969 520 ntBASIC15.11■□□□□ 0.01
SLC6A12P48065 AL390754.1-201ENST00000619088 582 ntBASIC15.11■□□□□ 0.01
SLC6A12P48065 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SLC6A12P48065 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SLC6A12P48065 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
SLC6A12P48065 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SLC6A12P48065 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SLC6A12P48065 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC6A12P48065 MROH4P-201ENST00000431302 1578 ntBASIC15.11■□□□□ 0.01
SLC6A12P48065 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A12P48065 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A12P48065 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A12P48065 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A12P48065 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A12P48065 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
SLC6A12P48065 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A12P48065 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A12P48065 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
SLC6A12P48065 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SLC6A12P48065 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SLC6A12P48065 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
SLC6A12P48065 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC6A12P48065 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms