Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.93□□□□□ -0.02
PTPN6P29350 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.92□□□□□ -0.02
PTPN6P29350 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.92□□□□□ -0.02
PTPN6P29350 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.92□□□□□ -0.02
PTPN6P29350 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.92□□□□□ -0.02
PTPN6P29350 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.92□□□□□ -0.02
PTPN6P29350 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.92□□□□□ -0.02
PTPN6P29350 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.92□□□□□ -0.02
PTPN6P29350 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.92□□□□□ -0.02
PTPN6P29350 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.92□□□□□ -0.02
PTPN6P29350 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.92□□□□□ -0.02
PTPN6P29350 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.92□□□□□ -0.02
PTPN6P29350 AC069262.1-201ENST00000539058 672 ntBASIC14.92□□□□□ -0.02
PTPN6P29350 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.92□□□□□ -0.02
PTPN6P29350 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.92□□□□□ -0.02
PTPN6P29350 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.92□□□□□ -0.02
PTPN6P29350 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PTPN6P29350 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.92□□□□□ -0.02
PTPN6P29350 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.92□□□□□ -0.02
PTPN6P29350 Z92544.3-201ENST00000624747 417 ntBASIC14.92□□□□□ -0.02
PTPN6P29350 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PTPN6P29350 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
PTPN6P29350 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTPN6P29350 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PTPN6P29350 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.91□□□□□ -0.02
PTPN6P29350 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PTPN6P29350 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 AC013726.1-201ENST00000563747 2285 ntBASIC14.91□□□□□ -0.02
PTPN6P29350 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.91□□□□□ -0.02
PTPN6P29350 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 AC148477.4-201ENST00000613430 1793 ntBASIC14.91□□□□□ -0.02
PTPN6P29350 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.91□□□□□ -0.02
PTPN6P29350 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 AP3S2-216ENST00000617003 1561 ntBASIC14.91□□□□□ -0.02
PTPN6P29350 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.91□□□□□ -0.02
PTPN6P29350 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PTPN6P29350 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PTPN6P29350 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PTPN6P29350 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PTPN6P29350 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.91□□□□□ -0.02
PTPN6P29350 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.91□□□□□ -0.02
PTPN6P29350 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.91□□□□□ -0.02
PTPN6P29350 RARRES2P9-201ENST00000565168 469 ntBASIC14.91□□□□□ -0.02
PTPN6P29350 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.91□□□□□ -0.02
PTPN6P29350 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.91□□□□□ -0.02
PTPN6P29350 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PTPN6P29350 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PTPN6P29350 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.91□□□□□ -0.02
PTPN6P29350 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
PTPN6P29350 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.91□□□□□ -0.02
PTPN6P29350 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.91□□□□□ -0.02
PTPN6P29350 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.91□□□□□ -0.02
PTPN6P29350 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTPN6P29350 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.91□□□□□ -0.02
PTPN6P29350 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.9□□□□□ -0.02
PTPN6P29350 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms