Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
APEX1P27695 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APEX1P27695 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
APEX1P27695 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.27□□□□□ -0.12
APEX1P27695 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APEX1P27695 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APEX1P27695 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
APEX1P27695 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.27□□□□□ -0.12
APEX1P27695 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APEX1P27695 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
APEX1P27695 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APEX1P27695 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.27□□□□□ -0.12
APEX1P27695 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
APEX1P27695 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
APEX1P27695 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APEX1P27695 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.27□□□□□ -0.12
APEX1P27695 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
APEX1P27695 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APEX1P27695 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
APEX1P27695 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
APEX1P27695 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.12
APEX1P27695 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APEX1P27695 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
APEX1P27695 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
APEX1P27695 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
APEX1P27695 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
APEX1P27695 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.27□□□□□ -0.13
APEX1P27695 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
APEX1P27695 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
APEX1P27695 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.27□□□□□ -0.13
APEX1P27695 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.27□□□□□ -0.13
APEX1P27695 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.27□□□□□ -0.13
APEX1P27695 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
APEX1P27695 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
APEX1P27695 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
APEX1P27695 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.27□□□□□ -0.13
APEX1P27695 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.27□□□□□ -0.13
APEX1P27695 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.27□□□□□ -0.13
APEX1P27695 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.27□□□□□ -0.13
APEX1P27695 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
APEX1P27695 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.27□□□□□ -0.13
APEX1P27695 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.27□□□□□ -0.13
APEX1P27695 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.27□□□□□ -0.13
APEX1P27695 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
APEX1P27695 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 U82695.1-201ENST00000635752 1889 ntBASIC14.27□□□□□ -0.13
APEX1P27695 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.27□□□□□ -0.13
APEX1P27695 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.27□□□□□ -0.13
APEX1P27695 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.27□□□□□ -0.13
APEX1P27695 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.27□□□□□ -0.13
APEX1P27695 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APEX1P27695 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
APEX1P27695 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.26□□□□□ -0.13
APEX1P27695 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.26□□□□□ -0.13
APEX1P27695 AC008677.1-201ENST00000519230 1561 ntBASIC14.26□□□□□ -0.13
APEX1P27695 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
APEX1P27695 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
APEX1P27695 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.26□□□□□ -0.13
APEX1P27695 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.26□□□□□ -0.13
APEX1P27695 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 AL365209.1-201ENST00000624418 6473 ntBASIC14.26□□□□□ -0.13
APEX1P27695 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.26□□□□□ -0.13
APEX1P27695 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.26□□□□□ -0.13
APEX1P27695 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
APEX1P27695 SPCS2P4-201ENST00000436160 681 ntBASIC14.26□□□□□ -0.13
APEX1P27695 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APEX1P27695 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.26□□□□□ -0.13
APEX1P27695 IGHV3-62-201ENST00000520057 340 ntBASIC14.26□□□□□ -0.13
APEX1P27695 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.26□□□□□ -0.13
APEX1P27695 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 269.3 ms