Protein–RNA interactions for Protein: P13637

ATP1A3, Sodium/potassium-transporting ATPase subunit alpha-3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3P13637 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP1A3P13637 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP1A3P13637 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP1A3P13637 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
ATP1A3P13637 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP1A3P13637 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.33■□□□□ 0.37
ATP1A3P13637 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.33■□□□□ 0.37
ATP1A3P13637 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP1A3P13637 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ATP1A3P13637 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP1A3P13637 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
ATP1A3P13637 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ATP1A3P13637 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ATP1A3P13637 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP1A3P13637 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP1A3P13637 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP1A3P13637 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP1A3P13637 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
ATP1A3P13637 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP1A3P13637 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP1A3P13637 AC136604.1-201ENST00000418535 575 ntBASIC17.33■□□□□ 0.36
ATP1A3P13637 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.33■□□□□ 0.36
ATP1A3P13637 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ATP1A3P13637 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.33■□□□□ 0.36
ATP1A3P13637 AC140113.2-201ENST00000604370 208 ntBASIC17.33■□□□□ 0.36
ATP1A3P13637 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP1A3P13637 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP1A3P13637 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP1A3P13637 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP1A3P13637 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ATP1A3P13637 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP1A3P13637 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP1A3P13637 ACE3P-201ENST00000423435 1973 ntBASIC17.33■□□□□ 0.36
ATP1A3P13637 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP1A3P13637 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
ATP1A3P13637 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP1A3P13637 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP1A3P13637 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
ATP1A3P13637 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP1A3P13637 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP1A3P13637 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.32■□□□□ 0.36
ATP1A3P13637 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP1A3P13637 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP1A3P13637 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ATP1A3P13637 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 AC026396.1-201ENST00000419388 421 ntBASIC17.32■□□□□ 0.36
ATP1A3P13637 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP1A3P13637 FAM58CP-201ENST00000435741 640 ntBASIC17.32■□□□□ 0.36
ATP1A3P13637 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP1A3P13637 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP1A3P13637 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP1A3P13637 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP1A3P13637 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP1A3P13637 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP1A3P13637 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP1A3P13637 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP1A3P13637 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP1A3P13637 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ATP1A3P13637 AP3S2-216ENST00000617003 1561 ntBASIC17.32■□□□□ 0.36
ATP1A3P13637 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP1A3P13637 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP1A3P13637 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP1A3P13637 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP1A3P13637 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
ATP1A3P13637 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP1A3P13637 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATP1A3P13637 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ATP1A3P13637 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP1A3P13637 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP1A3P13637 AC079140.1-201ENST00000508039 487 ntBASIC17.31■□□□□ 0.36
ATP1A3P13637 RNA5SP416-201ENST00000516838 111 ntBASIC17.31■□□□□ 0.36
ATP1A3P13637 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP1A3P13637 BX640515.1-201ENST00000617215 977 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms