Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL2P13500 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL2P13500 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL2P13500 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CCL2P13500 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL2P13500 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL2P13500 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 HMGN1P19-201ENST00000436976 333 ntBASIC13.71□□□□□ -0.21
CCL2P13500 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL2P13500 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL2P13500 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL2P13500 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.71□□□□□ -0.21
CCL2P13500 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CCL2P13500 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL2P13500 AC135586.1-201ENST00000539323 574 ntBASIC13.71□□□□□ -0.21
CCL2P13500 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.71□□□□□ -0.21
CCL2P13500 AC011467.4-201ENST00000594891 528 ntBASIC13.71□□□□□ -0.21
CCL2P13500 AC136621.1-201ENST00000624017 2304 ntBASIC13.71□□□□□ -0.21
CCL2P13500 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL2P13500 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL2P13500 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL2P13500 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CCL2P13500 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL2P13500 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL2P13500 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.71□□□□□ -0.22
CCL2P13500 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CCL2P13500 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.71□□□□□ -0.22
CCL2P13500 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.71□□□□□ -0.22
CCL2P13500 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CCL2P13500 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL2P13500 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CCL2P13500 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CCL2P13500 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CCL2P13500 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL2P13500 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CCL2P13500 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL2P13500 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL2P13500 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCL2P13500 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.7□□□□□ -0.22
CCL2P13500 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.7□□□□□ -0.22
CCL2P13500 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL2P13500 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL2P13500 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 Z97205.2-201ENST00000564697 1639 ntBASIC13.7□□□□□ -0.22
CCL2P13500 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCL2P13500 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL2P13500 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CCL2P13500 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CCL2P13500 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL2P13500 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL2P13500 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL2P13500 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL2P13500 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 MST1L-201ENST00000442552 2185 ntBASIC13.69□□□□□ -0.22
CCL2P13500 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CCL2P13500 AC127383.1-201ENST00000444697 1800 ntBASIC13.69□□□□□ -0.22
CCL2P13500 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms