Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SP9P0CG40 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
SP9P0CG40 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SP9P0CG40 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.19■□□□□ 0.02
SP9P0CG40 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.19■□□□□ 0.02
SP9P0CG40 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SP9P0CG40 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.18■□□□□ 0.02
SP9P0CG40 AC074138.1-201ENST00000611182 1303 ntBASIC15.18■□□□□ 0.02
SP9P0CG40 RNF216P1-203ENST00000404404 2427 ntBASIC15.18■□□□□ 0.02
SP9P0CG40 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SP9P0CG40 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
SP9P0CG40 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.18■□□□□ 0.02
SP9P0CG40 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.18■□□□□ 0.02
SP9P0CG40 AC079112.1-201ENST00000454972 939 ntBASIC15.18■□□□□ 0.02
SP9P0CG40 RCC2P8-201ENST00000502779 1035 ntBASIC15.18■□□□□ 0.02
SP9P0CG40 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
SP9P0CG40 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.18■□□□□ 0.02
SP9P0CG40 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
SP9P0CG40 MIR4783-201ENST00000580343 82 ntBASIC15.18■□□□□ 0.02
SP9P0CG40 AL132994.2-201ENST00000603120 687 ntBASIC15.18■□□□□ 0.02
SP9P0CG40 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.18■□□□□ 0.02
SP9P0CG40 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SP9P0CG40 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SP9P0CG40 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.18■□□□□ 0.02
SP9P0CG40 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.18■□□□□ 0.02
SP9P0CG40 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SP9P0CG40 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SP9P0CG40 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.17■□□□□ 0.02
SP9P0CG40 AC139713.2-201ENST00000641328 2723 ntBASIC15.17■□□□□ 0.02
SP9P0CG40 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.17■□□□□ 0.02
SP9P0CG40 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SP9P0CG40 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.17■□□□□ 0.02
SP9P0CG40 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.17■□□□□ 0.02
SP9P0CG40 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.17■□□□□ 0.02
SP9P0CG40 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.17■□□□□ 0.02
SP9P0CG40 AL157792.1-201ENST00000488281 530 ntBASIC15.17■□□□□ 0.02
SP9P0CG40 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.17■□□□□ 0.02
SP9P0CG40 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.17■□□□□ 0.02
SP9P0CG40 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.17■□□□□ 0.02
SP9P0CG40 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.17■□□□□ 0.02
SP9P0CG40 AL031713.1-201ENST00000564813 661 ntBASIC15.17■□□□□ 0.02
SP9P0CG40 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.17■□□□□ 0.02
SP9P0CG40 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.17■□□□□ 0.02
SP9P0CG40 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.17■□□□□ 0.02
SP9P0CG40 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.17■□□□□ 0.02
SP9P0CG40 MIR4313-201ENST00000580760 101 ntBASIC15.17■□□□□ 0.02
SP9P0CG40 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
SP9P0CG40 MIR4649-201ENST00000582839 64 ntBASIC15.17■□□□□ 0.02
SP9P0CG40 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SP9P0CG40 AL136301.1-201ENST00000615830 422 ntBASIC15.17■□□□□ 0.02
SP9P0CG40 AC242376.2-201ENST00000619355 883 ntBASIC15.17■□□□□ 0.02
SP9P0CG40 AL603764.1-201ENST00000636452 321 ntBASIC15.17■□□□□ 0.02
SP9P0CG40 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.17■□□□□ 0.02
SP9P0CG40 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SP9P0CG40 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SP9P0CG40 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 CLUHP2-201ENST00000426660 1303 ntBASIC15.17■□□□□ 0.02
SP9P0CG40 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP9P0CG40 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SP9P0CG40 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.16■□□□□ 0.02
SP9P0CG40 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms