Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CD48P09326 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD48P09326 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD48P09326 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD48P09326 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD48P09326 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.27■□□□□ 0.2
CD48P09326 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.27■□□□□ 0.2
CD48P09326 AC107890.1-201ENST00000422478 521 ntBASIC16.27■□□□□ 0.2
CD48P09326 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.27■□□□□ 0.2
CD48P09326 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.27■□□□□ 0.2
CD48P09326 AC027369.6-201ENST00000525520 931 ntBASIC16.27■□□□□ 0.2
CD48P09326 AC140878.1-201ENST00000565277 250 ntBASIC16.27■□□□□ 0.2
CD48P09326 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.27■□□□□ 0.2
CD48P09326 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.27■□□□□ 0.2
CD48P09326 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CD48P09326 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.27■□□□□ 0.2
CD48P09326 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.27■□□□□ 0.2
CD48P09326 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD48P09326 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.27■□□□□ 0.2
CD48P09326 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.27■□□□□ 0.2
CD48P09326 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD48P09326 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CD48P09326 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CD48P09326 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD48P09326 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.27■□□□□ 0.19
CD48P09326 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD48P09326 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CD48P09326 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD48P09326 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CD48P09326 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.27■□□□□ 0.19
CD48P09326 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD48P09326 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
CD48P09326 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CD48P09326 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.27■□□□□ 0.19
CD48P09326 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD48P09326 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.27■□□□□ 0.19
CD48P09326 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD48P09326 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CD48P09326 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.27■□□□□ 0.19
CD48P09326 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.27■□□□□ 0.19
CD48P09326 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.26■□□□□ 0.19
CD48P09326 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.26■□□□□ 0.19
CD48P09326 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.26■□□□□ 0.19
CD48P09326 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CD48P09326 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CD48P09326 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CD48P09326 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CD48P09326 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.26■□□□□ 0.19
CD48P09326 SERBP1P3-201ENST00000459980 809 ntBASIC16.26■□□□□ 0.19
CD48P09326 AC097493.3-201ENST00000509725 367 ntBASIC16.26■□□□□ 0.19
CD48P09326 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.26■□□□□ 0.19
CD48P09326 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 DUX4L27-201ENST00000554796 1261 ntBASIC16.26■□□□□ 0.19
CD48P09326 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.26■□□□□ 0.19
CD48P09326 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CD48P09326 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.26■□□□□ 0.19
CD48P09326 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CD48P09326 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 CICP11-201ENST00000434745 2827 ntBASIC16.26■□□□□ 0.19
CD48P09326 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD48P09326 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CD48P09326 AC084364.1-201ENST00000551967 1556 ntBASIC16.26■□□□□ 0.19
CD48P09326 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.25■□□□□ 0.19
CD48P09326 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.25■□□□□ 0.19
CD48P09326 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CD48P09326 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 AC126365.1-201ENST00000578585 1514 ntBASIC16.25■□□□□ 0.19
CD48P09326 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CD48P09326 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms