Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SERPINA13P-202ENST00000478994 924 ntBASIC16.45■□□□□ 0.22
RB1P06400 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.45■□□□□ 0.22
RB1P06400 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.45■□□□□ 0.22
RB1P06400 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.45■□□□□ 0.22
RB1P06400 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.45■□□□□ 0.22
RB1P06400 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.45■□□□□ 0.22
RB1P06400 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.45■□□□□ 0.22
RB1P06400 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RB1P06400 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.45■□□□□ 0.22
RB1P06400 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RB1P06400 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RB1P06400 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.45■□□□□ 0.22
RB1P06400 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RB1P06400 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.45■□□□□ 0.22
RB1P06400 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RB1P06400 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
RB1P06400 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RB1P06400 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RB1P06400 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RB1P06400 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RB1P06400 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.45■□□□□ 0.22
RB1P06400 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RB1P06400 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.45■□□□□ 0.22
RB1P06400 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
RB1P06400 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
RB1P06400 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.44■□□□□ 0.22
RB1P06400 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RB1P06400 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RB1P06400 AC148477.4-201ENST00000613430 1793 ntBASIC16.44■□□□□ 0.22
RB1P06400 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.44■□□□□ 0.22
RB1P06400 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RB1P06400 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RB1P06400 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.44■□□□□ 0.22
RB1P06400 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RB1P06400 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.44■□□□□ 0.22
RB1P06400 CYP46A4P-201ENST00000414953 267 ntBASIC16.44■□□□□ 0.22
RB1P06400 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 TMEM198B-204ENST00000484016 896 ntBASIC16.44■□□□□ 0.22
RB1P06400 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.44■□□□□ 0.22
RB1P06400 AC245884.6-201ENST00000515672 1067 ntBASIC16.44■□□□□ 0.22
RB1P06400 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.44■□□□□ 0.22
RB1P06400 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.44■□□□□ 0.22
RB1P06400 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.44■□□□□ 0.22
RB1P06400 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.44■□□□□ 0.22
RB1P06400 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.44■□□□□ 0.22
RB1P06400 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RB1P06400 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
RB1P06400 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RB1P06400 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RB1P06400 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RB1P06400 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.44■□□□□ 0.22
RB1P06400 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.44■□□□□ 0.22
RB1P06400 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.44■□□□□ 0.22
RB1P06400 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RB1P06400 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RB1P06400 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.43■□□□□ 0.22
RB1P06400 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.43■□□□□ 0.22
RB1P06400 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.43■□□□□ 0.22
RB1P06400 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.43■□□□□ 0.22
RB1P06400 AC080080.1-201ENST00000625121 2420 ntBASIC16.43■□□□□ 0.22
RB1P06400 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.43■□□□□ 0.22
RB1P06400 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 AL139094.1-201ENST00000405549 1188 ntBASIC16.43■□□□□ 0.22
RB1P06400 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.43■□□□□ 0.22
RB1P06400 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.43■□□□□ 0.22
RB1P06400 RN7SL720P-201ENST00000488178 304 ntBASIC16.43■□□□□ 0.22
RB1P06400 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 MIR4313-201ENST00000580760 101 ntBASIC16.43■□□□□ 0.22
RB1P06400 AC097724.1-201ENST00000609581 426 ntBASIC16.43■□□□□ 0.22
RB1P06400 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.43■□□□□ 0.22
RB1P06400 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RB1P06400 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms