Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.87■□□□□ 0.61
APPP05067 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APPP05067 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APPP05067 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APPP05067 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.87■□□□□ 0.61
APPP05067 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
APPP05067 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APPP05067 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APPP05067 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
APPP05067 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.87■□□□□ 0.61
APPP05067 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.87■□□□□ 0.61
APPP05067 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.87■□□□□ 0.61
APPP05067 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.87■□□□□ 0.61
APPP05067 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APPP05067 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.87■□□□□ 0.61
APPP05067 MEIS3P1-201ENST00000495167 958 ntBASIC18.87■□□□□ 0.61
APPP05067 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.87■□□□□ 0.61
APPP05067 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APPP05067 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APPP05067 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.87■□□□□ 0.61
APPP05067 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.87■□□□□ 0.61
APPP05067 AC023310.3-201ENST00000557027 670 ntBASIC18.87■□□□□ 0.61
APPP05067 AC100756.1-201ENST00000562736 682 ntBASIC18.87■□□□□ 0.61
APPP05067 AC138749.3-201ENST00000567691 622 ntBASIC18.87■□□□□ 0.61
APPP05067 AC092337.1-201ENST00000568699 1129 ntBASIC18.87■□□□□ 0.61
APPP05067 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.87■□□□□ 0.61
APPP05067 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
APPP05067 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
APPP05067 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.87■□□□□ 0.61
APPP05067 AC116165.1-201ENST00000611806 668 ntBASIC18.87■□□□□ 0.61
APPP05067 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
APPP05067 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
APPP05067 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APPP05067 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APPP05067 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
APPP05067 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
APPP05067 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.86■□□□□ 0.61
APPP05067 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.86■□□□□ 0.61
APPP05067 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
APPP05067 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.86■□□□□ 0.61
APPP05067 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
APPP05067 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.86■□□□□ 0.61
APPP05067 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.86■□□□□ 0.61
APPP05067 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.86■□□□□ 0.61
APPP05067 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.86■□□□□ 0.61
APPP05067 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.86■□□□□ 0.61
APPP05067 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.86■□□□□ 0.61
APPP05067 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
APPP05067 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.86■□□□□ 0.61
APPP05067 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
APPP05067 AC132872.4-202ENST00000622924 2756 ntBASIC18.86■□□□□ 0.61
APPP05067 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
APPP05067 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APPP05067 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.85■□□□□ 0.61
APPP05067 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.85■□□□□ 0.61
APPP05067 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.85■□□□□ 0.61
APPP05067 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 AC092127.1-201ENST00000567093 3455 ntBASIC18.85■□□□□ 0.61
APPP05067 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
APPP05067 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
APPP05067 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.85■□□□□ 0.61
APPP05067 AC015922.1-201ENST00000421102 1152 ntBASIC18.85■□□□□ 0.61
APPP05067 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 SLED1-202ENST00000512051 380 ntBASIC18.85■□□□□ 0.61
APPP05067 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.85■□□□□ 0.61
APPP05067 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 AC190387.1-201ENST00000551683 408 ntBASIC18.85■□□□□ 0.61
APPP05067 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.85■□□□□ 0.61
APPP05067 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.85■□□□□ 0.61
APPP05067 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APPP05067 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms