Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AP005901.3-202ENST00000581653 237 ntBASIC14.09□□□□□ -0.15
APOA1P02647 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.09□□□□□ -0.15
APOA1P02647 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.09□□□□□ -0.15
APOA1P02647 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
APOA1P02647 AP001350.2-201ENST00000625104 1094 ntBASIC14.09□□□□□ -0.15
APOA1P02647 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.09□□□□□ -0.15
APOA1P02647 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOA1P02647 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA1P02647 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOA1P02647 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
APOA1P02647 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA1P02647 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
APOA1P02647 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA1P02647 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA1P02647 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA1P02647 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA1P02647 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA1P02647 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA1P02647 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
APOA1P02647 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.09□□□□□ -0.15
APOA1P02647 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA1P02647 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA1P02647 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA1P02647 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOA1P02647 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
APOA1P02647 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOA1P02647 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.08□□□□□ -0.15
APOA1P02647 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOA1P02647 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
APOA1P02647 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
APOA1P02647 SLC22A20-204ENST00000530038 1673 ntBASIC14.08□□□□□ -0.16
APOA1P02647 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
APOA1P02647 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.08□□□□□ -0.16
APOA1P02647 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.08□□□□□ -0.16
APOA1P02647 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.08□□□□□ -0.16
APOA1P02647 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
APOA1P02647 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
APOA1P02647 PMS2P1-201ENST00000431037 1228 ntBASIC14.08□□□□□ -0.16
APOA1P02647 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
APOA1P02647 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.08□□□□□ -0.16
APOA1P02647 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.08□□□□□ -0.16
APOA1P02647 AC011498.5-201ENST00000592027 486 ntBASIC14.08□□□□□ -0.16
APOA1P02647 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.08□□□□□ -0.16
APOA1P02647 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
APOA1P02647 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 TCAF1P1-201ENST00000414990 2232 ntBASIC14.08□□□□□ -0.16
APOA1P02647 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 AC126365.1-201ENST00000578585 1514 ntBASIC14.08□□□□□ -0.16
APOA1P02647 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.08□□□□□ -0.16
APOA1P02647 AC027601.5-201ENST00000624065 2482 ntBASIC14.08□□□□□ -0.16
APOA1P02647 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.08□□□□□ -0.16
APOA1P02647 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
APOA1P02647 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
APOA1P02647 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
APOA1P02647 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.08□□□□□ -0.16
APOA1P02647 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
APOA1P02647 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.08□□□□□ -0.16
APOA1P02647 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
APOA1P02647 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.08□□□□□ -0.16
APOA1P02647 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
APOA1P02647 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA1P02647 AC011477.6-201ENST00000604980 1927 ntBASIC14.07□□□□□ -0.16
APOA1P02647 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA1P02647 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA1P02647 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
APOA1P02647 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOA1P02647 AL353732.1-201ENST00000569618 1459 ntBASIC14.07□□□□□ -0.16
APOA1P02647 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA1P02647 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA1P02647 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA1P02647 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA1P02647 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.07□□□□□ -0.16
APOA1P02647 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.07□□□□□ -0.16
APOA1P02647 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA1P02647 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA1P02647 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOA1P02647 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOA1P02647 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA1P02647 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
APOA1P02647 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms