Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.57■□□□□ 0.4
GGPS1O95749 MSTO2P-201ENST00000314835 1709 ntBASIC17.57■□□□□ 0.4
GGPS1O95749 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.57■□□□□ 0.4
GGPS1O95749 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.57■□□□□ 0.4
GGPS1O95749 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
GGPS1O95749 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GGPS1O95749 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GGPS1O95749 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
GGPS1O95749 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.57■□□□□ 0.4
GGPS1O95749 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GGPS1O95749 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.57■□□□□ 0.4
GGPS1O95749 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
GGPS1O95749 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.56■□□□□ 0.4
GGPS1O95749 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GGPS1O95749 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
GGPS1O95749 AC005229.1-201ENST00000392885 409 ntBASIC17.56■□□□□ 0.4
GGPS1O95749 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.56■□□□□ 0.4
GGPS1O95749 BAATP1-201ENST00000412284 1225 ntBASIC17.56■□□□□ 0.4
GGPS1O95749 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
GGPS1O95749 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 AC093433.1-201ENST00000458048 571 ntBASIC17.56■□□□□ 0.4
GGPS1O95749 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.56■□□□□ 0.4
GGPS1O95749 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 AP001063.1-201ENST00000568332 529 ntBASIC17.56■□□□□ 0.4
GGPS1O95749 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.56■□□□□ 0.4
GGPS1O95749 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GGPS1O95749 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.56■□□□□ 0.4
GGPS1O95749 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GGPS1O95749 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.56■□□□□ 0.4
GGPS1O95749 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GGPS1O95749 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.55■□□□□ 0.4
GGPS1O95749 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
GGPS1O95749 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
GGPS1O95749 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.55■□□□□ 0.4
GGPS1O95749 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.55■□□□□ 0.4
GGPS1O95749 AL355864.2-201ENST00000447420 863 ntBASIC17.55■□□□□ 0.4
GGPS1O95749 KLF2P4-201ENST00000451959 1225 ntBASIC17.55■□□□□ 0.4
GGPS1O95749 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.55■□□□□ 0.4
GGPS1O95749 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.55■□□□□ 0.4
GGPS1O95749 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
GGPS1O95749 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.55■□□□□ 0.4
GGPS1O95749 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.55■□□□□ 0.4
GGPS1O95749 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GGPS1O95749 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GGPS1O95749 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.55■□□□□ 0.4
GGPS1O95749 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.55■□□□□ 0.4
GGPS1O95749 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GGPS1O95749 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.55■□□□□ 0.4
GGPS1O95749 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.54■□□□□ 0.4
GGPS1O95749 AC008741.2-201ENST00000612792 3115 ntBASIC17.54■□□□□ 0.4
GGPS1O95749 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 AC134312.5-201ENST00000568031 1313 ntBASIC17.54■□□□□ 0.4
GGPS1O95749 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.54■□□□□ 0.4
GGPS1O95749 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.54■□□□□ 0.4
GGPS1O95749 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.54■□□□□ 0.4
GGPS1O95749 AC012441.1-201ENST00000446669 685 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms