Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CNOT4O95628 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.03□□□□□ -0.16
CNOT4O95628 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.03□□□□□ -0.16
CNOT4O95628 AL391825.1-201ENST00000457671 1364 ntBASIC14.03□□□□□ -0.16
CNOT4O95628 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.03□□□□□ -0.16
CNOT4O95628 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.03□□□□□ -0.16
CNOT4O95628 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.03□□□□□ -0.16
CNOT4O95628 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CNOT4O95628 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CNOT4O95628 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.03□□□□□ -0.16
CNOT4O95628 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.03□□□□□ -0.16
CNOT4O95628 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.03□□□□□ -0.16
CNOT4O95628 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.03□□□□□ -0.16
CNOT4O95628 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CNOT4O95628 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.03□□□□□ -0.16
CNOT4O95628 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNOT4O95628 AC092364.2-201ENST00000596710 2692 ntBASIC14.02□□□□□ -0.16
CNOT4O95628 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CNOT4O95628 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNOT4O95628 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNOT4O95628 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CNOT4O95628 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CNOT4O95628 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.02□□□□□ -0.16
CNOT4O95628 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.02□□□□□ -0.16
CNOT4O95628 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.02□□□□□ -0.16
CNOT4O95628 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.16
CNOT4O95628 AC134407.2-201ENST00000625089 1978 ntBASIC14.02□□□□□ -0.16
CNOT4O95628 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CNOT4O95628 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNOT4O95628 AC097376.2-205ENST00000610159 5334 ntBASIC14.02□□□□□ -0.16
CNOT4O95628 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNOT4O95628 AC022188.1-201ENST00000620960 1664 ntBASIC14.02□□□□□ -0.16
CNOT4O95628 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNOT4O95628 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CNOT4O95628 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.02□□□□□ -0.17
CNOT4O95628 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNOT4O95628 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNOT4O95628 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.02□□□□□ -0.17
CNOT4O95628 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.02□□□□□ -0.17
CNOT4O95628 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNOT4O95628 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CNOT4O95628 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.02□□□□□ -0.17
CNOT4O95628 AZGP1P1-201ENST00000411909 902 ntBASIC14.02□□□□□ -0.17
CNOT4O95628 AC136604.1-201ENST00000418535 575 ntBASIC14.02□□□□□ -0.17
CNOT4O95628 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CNOT4O95628 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.02□□□□□ -0.17
CNOT4O95628 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.02□□□□□ -0.17
CNOT4O95628 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CNOT4O95628 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.02□□□□□ -0.17
CNOT4O95628 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.02□□□□□ -0.17
CNOT4O95628 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.02□□□□□ -0.17
CNOT4O95628 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNOT4O95628 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CNOT4O95628 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CNOT4O95628 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNOT4O95628 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CNOT4O95628 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CNOT4O95628 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNOT4O95628 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.02□□□□□ -0.17
CNOT4O95628 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CNOT4O95628 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNOT4O95628 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNOT4O95628 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
CNOT4O95628 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNOT4O95628 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
CNOT4O95628 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNOT4O95628 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CNOT4O95628 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNOT4O95628 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CNOT4O95628 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNOT4O95628 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.01□□□□□ -0.17
CNOT4O95628 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.01□□□□□ -0.17
CNOT4O95628 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.01□□□□□ -0.17
CNOT4O95628 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.01□□□□□ -0.17
CNOT4O95628 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CNOT4O95628 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CNOT4O95628 CU639417.3-201ENST00000624240 1404 ntBASIC14.01□□□□□ -0.17
CNOT4O95628 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CNOT4O95628 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNOT4O95628 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNOT4O95628 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.01□□□□□ -0.17
CNOT4O95628 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNOT4O95628 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.01□□□□□ -0.17
CNOT4O95628 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.01□□□□□ -0.17
CNOT4O95628 AC093004.1-201ENST00000508850 424 ntBASIC14.01□□□□□ -0.17
CNOT4O95628 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.01□□□□□ -0.17
CNOT4O95628 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms