Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.86□□□□□ -0.03
SNX4O95219 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX4O95219 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX4O95219 AC061975.2-201ENST00000581722 295 ntBASIC14.86□□□□□ -0.03
SNX4O95219 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX4O95219 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SNX4O95219 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX4O95219 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.86□□□□□ -0.03
SNX4O95219 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SNX4O95219 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX4O95219 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
SNX4O95219 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
SNX4O95219 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX4O95219 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX4O95219 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.86□□□□□ -0.03
SNX4O95219 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX4O95219 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.85□□□□□ -0.03
SNX4O95219 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.85□□□□□ -0.03
SNX4O95219 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.85□□□□□ -0.03
SNX4O95219 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.85□□□□□ -0.03
SNX4O95219 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 AC007292.2-201ENST00000593524 1812 ntBASIC14.85□□□□□ -0.03
SNX4O95219 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SNX4O95219 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.85□□□□□ -0.03
SNX4O95219 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.85□□□□□ -0.03
SNX4O95219 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 MIR943-201ENST00000401286 94 ntBASIC14.85□□□□□ -0.03
SNX4O95219 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SNX4O95219 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.85□□□□□ -0.03
SNX4O95219 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.85□□□□□ -0.03
SNX4O95219 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.85□□□□□ -0.03
SNX4O95219 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.85□□□□□ -0.03
SNX4O95219 AL158211.3-201ENST00000607385 239 ntBASIC14.85□□□□□ -0.03
SNX4O95219 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.85□□□□□ -0.03
SNX4O95219 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SNX4O95219 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SNX4O95219 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 AL592424.1-201ENST00000563624 1536 ntBASIC14.85□□□□□ -0.03
SNX4O95219 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.85□□□□□ -0.03
SNX4O95219 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX4O95219 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SNX4O95219 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.84□□□□□ -0.03
SNX4O95219 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX4O95219 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.84□□□□□ -0.03
SNX4O95219 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.84□□□□□ -0.03
SNX4O95219 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX4O95219 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX4O95219 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX4O95219 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.84□□□□□ -0.03
SNX4O95219 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.84□□□□□ -0.03
SNX4O95219 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX4O95219 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.84□□□□□ -0.03
SNX4O95219 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX4O95219 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
SNX4O95219 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX4O95219 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX4O95219 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SNX4O95219 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX4O95219 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.84□□□□□ -0.03
SNX4O95219 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNX4O95219 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX4O95219 MIR770-201ENST00000390219 98 ntBASIC14.84□□□□□ -0.03
SNX4O95219 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SNX4O95219 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX4O95219 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.84□□□□□ -0.03
SNX4O95219 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.84□□□□□ -0.03
SNX4O95219 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.84□□□□□ -0.03
SNX4O95219 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SNX4O95219 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.84□□□□□ -0.03
SNX4O95219 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.84□□□□□ -0.03
SNX4O95219 RNA5SP421-201ENST00000516864 134 ntBASIC14.84□□□□□ -0.03
SNX4O95219 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.84□□□□□ -0.03
SNX4O95219 DUX4L27-201ENST00000554796 1261 ntBASIC14.84□□□□□ -0.03
SNX4O95219 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.84□□□□□ -0.03
SNX4O95219 MIR4321-201ENST00000592276 80 ntBASIC14.84□□□□□ -0.03
SNX4O95219 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.84□□□□□ -0.03
SNX4O95219 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms