Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN5O00501 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 AC105250.1-201ENST00000509378 2057 ntBASIC16.51■□□□□ 0.23
CLDN5O00501 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CLDN5O00501 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLDN5O00501 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
CLDN5O00501 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN5O00501 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN5O00501 RN7SL837P-201ENST00000463010 287 ntBASIC16.51■□□□□ 0.23
CLDN5O00501 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN5O00501 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.51■□□□□ 0.23
CLDN5O00501 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLDN5O00501 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CLDN5O00501 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.51■□□□□ 0.23
CLDN5O00501 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.51■□□□□ 0.23
CLDN5O00501 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLDN5O00501 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CLDN5O00501 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CLDN5O00501 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN5O00501 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
CLDN5O00501 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN5O00501 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN5O00501 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN5O00501 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLDN5O00501 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
CLDN5O00501 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN5O00501 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN5O00501 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CLDN5O00501 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN5O00501 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN5O00501 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CLDN5O00501 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CLDN5O00501 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN5O00501 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN5O00501 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN5O00501 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.5■□□□□ 0.23
CLDN5O00501 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.5■□□□□ 0.23
CLDN5O00501 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN5O00501 AL033527.5-201ENST00000641382 801 ntBASIC16.5■□□□□ 0.23
CLDN5O00501 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN5O00501 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN5O00501 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN5O00501 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN5O00501 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN5O00501 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN5O00501 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN5O00501 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN5O00501 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN5O00501 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN5O00501 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLDN5O00501 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN5O00501 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 AC063926.2-201ENST00000623766 1308 ntBASIC16.49■□□□□ 0.23
CLDN5O00501 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN5O00501 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN5O00501 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN5O00501 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLDN5O00501 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLDN5O00501 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN5O00501 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN5O00501 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN5O00501 AL442647.2-201ENST00000429864 857 ntBASIC16.49■□□□□ 0.23
CLDN5O00501 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN5O00501 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN5O00501 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.49■□□□□ 0.23
CLDN5O00501 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CLDN5O00501 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.49■□□□□ 0.23
CLDN5O00501 AC239800.4-201ENST00000603712 296 ntBASIC16.49■□□□□ 0.23
CLDN5O00501 AC133539.2-201ENST00000604757 467 ntBASIC16.49■□□□□ 0.23
CLDN5O00501 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms