Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM6-TRIM34B2RNG4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AL136379.1-201ENST00000623471 2642 ntBASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 TREML5P-201ENST00000421694 576 ntBASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 SERBP1P3-201ENST00000459980 809 ntBASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC067863.1-201ENST00000494933 530 ntBASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6-TRIM34B2RNG4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC015911.4-201ENST00000588022 1070 ntBASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6-TRIM34B2RNG4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AL512361.1-201ENST00000554200 418 ntBASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms